All Competitors

Every biological foundation model, evaluated and ranked by the bio.rodeo team

Showing 121125 of 125 filtered models

  • RNABERT

    561345.1K
    Keio UniversityFebruary 22, 2022foundation_modellanguage_modelstructure_prediction

    RNA language model that learns base-level embeddings capturing sequence context and secondary structure, enabling fast structural alignment.

    RNA
    34Openness
  • ProteinBERT

    579981
    Hebrew University of JerusalemJanuary 13, 2022foundation_modelgene_ontologylanguage_model+1

    Protein language model pretrained on UniRef90 with masked language modeling and Gene Ontology annotation prediction, at 16 million parameters.

    Protein
    86Openness
  • AbLang

    167217
    Oxford Protein Informatics Group (OPIG)January 1, 2022antibodyfoundation_modelimmunology+2

    Antibody-specific language model trained on the OAS database for restoring missing residues and generating high-quality sequence representations.

    Protein
    62Openness
  • ESM-1v

    4.2K902
    Meta AIJuly 9, 2021foundation_modellanguage_modelvariant_effect_prediction

    Protein language model for zero-shot variant effect prediction, scoring mutations by log-odds from evolutionary sequences with no MSA or assay data.

    Protein
    72Openness
  • Big Bird

    6333K341.8K
    Google ResearchJuly 28, 2020dnafoundation_modelgenomics+4

    Sparse attention transformer that extends BERT to 8x longer sequences via random, local, and global attention, with genomic sequence applications.

    DNA & Gene
    49Openness