All Competitors

Every biological foundation model, evaluated and ranked by the bio.rodeo team

Showing 2531 of 31 filtered models

  • LaMIM

    1922
    West China Hospital of Sichuan University +1 otherApril 17, 2024autoencoderbrain_mrifoundation_model+6

    Brain MRI foundation model pretrained with masked image modeling on roughly 57,000 multi-contrast head scans for brain tumor diagnosis.

    Imaging
    15Openness
  • IMPA

    2657
    Theis LabJanuary 8, 2024autoencodercell_biologydrug_discovery+5

    Generative image perturbation autoencoder predicting cellular morphological responses to chemical and genetic perturbations from control images.

    Single-cell
    53Openness
  • Google ResearchDecember 4, 2023acoustic_biomarkersaudio_classificationautoencoder+6

    Health acoustics foundation model that turns short clips of coughs and breaths into embeddings for building acoustic biomarker models with less data.

    Biosignals
  • mEthAE

    34
    Wageningen University & ResearchJuly 18, 2023autoencoderdna_methylationepigenomic_prediction+3

    Chromosome-wise explainable autoencoder that compresses DNA methylation array data up to 400-fold while keeping CpG groupings interpretable.

    DNA & Gene
    47Openness
  • XA4C

    3
    University of CalgaryJuly 17, 2023autoencodercell_type_annotationgene_expression+3

    Explainable autoencoder for transcriptome analysis that uses SHAP attribution on latent variables to identify critical genes driving gene expression.

    Single-cell
    58Openness
  • M3AE

    134192
    Shenzhen Research Institute of Big Data +2 othersSeptember 15, 2022autoencoderimage_text_retrievalmultimodal+5

    Self-supervised medical vision-and-language pretraining via multi-modal masked autoencoders that reconstruct masked image patches and text tokens.

    PathologyLanguage model
    29Openness
  • CPA

    149321
    Theis LabApril 15, 2021autoencoderdrug_response_modelinggenerative+5

    Single-cell perturbation prediction model that forecasts transcriptional responses to drug combinations and doses never experimentally measured.

    Single-cell
    78Openness