All Competitors
Every biological foundation model, evaluated and ranked by the bio.rodeo team
Showing 433–456 of 518 filtered models
HuatuoGPT-Vision
3992042.8KShenzhen Research Institute of Big Data +1 otherJune 27, 2024histologyinstruction_tuningmedical_image_understanding+5Open medical multimodal LLMs (7B and 34B) for visual question answering over radiology, pathology, and endoscopy images, trained on PubMedVision.
PathologyLanguage model52OpennessCREMA
—7—Self-supervised foundation model for 12-lead ECG, pairing masked autoencoder pretraining with contrastive regularization for robust diagnostics.
Biosignals10OpennessBrainMAE
—10—Self-supervised masked autoencoder for functional MRI that learns representations from BOLD time-series with per-ROI embeddings and graph attention.
Biosignals17OpennessOPERA
8346—Respiratory acoustic foundation models pretrained on roughly 136K cough and breathing recordings for disease detection and lung function estimation.
Biosignals59OpennessCellFM
11078—Single-cell foundation model with 800M parameters trained on ~100 million human cells, for annotation, perturbation prediction, and gene analysis.
Single-cell26OpennessMULAN
251047Multimodal protein language model extending ESM-2 and SaProt with a Structure Adapter over residue torsion angles for protein function prediction.
Protein83OpennessLaBraM
646398—EEG foundation model that learns transferable brain-signal representations with a vector-quantized tokenizer and masked transformer pretraining.
Biosignals72OpennessECG foundation model that learns 12-lead waveform representations by contrastively aligning each recording with machine-generated cardiological text.
Biosignals63OpennessCellSeg3D
1221—Self-supervised 3D cell segmentation for fluorescence microscopy, pairing WNet3D with Swin-UNetR to segment volumes without annotated training data.
Imaging89OpennessLOBSTER
1657—Efficient protein language model library from Prescient Design enabling high-quality sequence representations and fitness prediction in 24 GPU hours.
Protein69OpennessDistributional Graphormer
2.5K158—Deep learning framework predicting equilibrium distributions of molecular systems, enabling efficient ensemble generation and conformation sampling.
Protein46OpennessEchoCLIP
51218—CLIP-style vision-language model for echocardiography, pretrained on echo videos and cardiologist reports for zero-shot cardiac interpretation.
Imaging32OpennessMed-Gemini
—410—Family of medical multimodal models built on Gemini, adding uncertainty-guided web search, custom modality encoders, and long-context EHR reasoning.
Language modelImaging8OpennessMedDr
1002846Hong Kong University of Science and TechnologyApril 23, 2024foundation_modelhistologyinstruction_tuning+7Generalist medical vision-language foundation model with 40B parameters, spanning radiology, pathology, dermatology, retinography, and endoscopy.
ImagingLanguage model69OpennessOpenCRISPR-1
1.2K80—AI-designed CRISPR-Cas9 gene editor generated by protein language models trained on 1.2 million CRISPR operons and shown to edit the human genome.
Protein16OpennessNicheformer
167144945Transformer foundation model pretrained on 110M single-cell and spatial transcriptomics profiles, transferring spatial context to dissociated cells.
Single-cell87OpennessMed-MoE
15889—Lightweight mixture-of-experts medical vision-language model routing visual question answering and image classification to domain-specific experts.
ImagingLanguage modelPathology81OpennessM3D
454172924Multimodal large language model for 3D medical imaging that handles report generation, visual question answering, and segmentation on CT volumes.
ImagingLanguage model77OpennessCONCH
5181K67.1KHistopathology vision-language foundation model pretrained on 1.17 million image-caption pairs with contrastive and captioning objectives.
Imaging44OpennessBrainMass
2557—Self-supervised foundation model for functional brain network analysis from resting-state fMRI, pretrained across 30 datasets for disorder diagnosis.
Biosignals18Openness