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models / biosignals / lead-eeg
Biosignals
University of North Carolina at CharlotteReleased February 2025

LEAD

EEG foundation model for Alzheimer's disease detection, pretrained by contrastive learning across 13 clinical EEG datasets and 2,238 subjects.

The short version

  • —Screens for Alzheimer's from routine scalp EEG rather than PET or CSF biomarkers
  • —Handles arbitrary recording length, channel montage, and sampling rate without resampling
  • —Gated fusion merges temporal and spatial attention over univariate EEG patches
  • —Subject-regularized training aggregates window predictions into a subject-level call
25Openness

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Electroencephalography is cheap, non-invasive, and widely available, which makes it an attractive substrate for screening cognitive decline — but the datasets are small. Individual Alzheimer's disease (AD) EEG cohorts typically hold a few dozen to a few hundred subjects, so deep models trained on one cohort rarely survive contact with another site's electrodes, amplifiers, or recording protocol. LEAD attacks that problem the way foundation models attack data scarcity elsewhere: pool everything, pretrain once, and transfer.

Developed by researchers at the University of North Carolina at Charlotte with collaborators at the Mediterranea University of Reggio Calabria and the EEG diagnostics company Cognision, LEAD was released as a preprint in February 2025. The authors curated what they describe as the largest EEG corpus assembled for Alzheimer's detection — 2,238 subjects across 13 pretraining datasets, four containing AD patients and nine covering other neurological conditions or healthy controls — and pretrained a transformer on it with a medical contrastive objective. Crucially, evaluation happens on five separate AD datasets that were never seen during pretraining, making this a cross-cohort transfer test rather than a held-out split.

The design contrast with general-purpose EEG backbones such as LaBraM and CBraMod is one of specialization: those models pretrain broadly and fine-tune to many downstream tasks, while LEAD targets a single clinical decision and buys its generality from disease-adjacent pretraining data.

#Key Features

  • Configuration-agnostic input: Recordings of arbitrary length, channel montage, and sampling rate are accepted directly, with 3D channel embeddings and sampling-rate embeddings added to each patch so heterogeneous cohorts can be pooled.
  • Gated temporal-spatial attention: Attention runs in parallel along the time and channel axes, and a learnable gating module fuses the two streams rather than stacking them sequentially.
  • Subject-regularized training: Batches are shuffled so each contains multiple windows from the same subject, and losses are computed on both window-level and aggregated subject-level predictions — matching how a clinical call is actually made.
  • Disease-adjacent pretraining: Nine non-AD neurological and healthy cohorts join the four AD cohorts during pretraining, letting the model learn general pathological EEG structure before ever seeing the downstream task.
  • Multi-sampling segmentation: Each recording is downsampled to 200, 100, and 50 Hz and cut into overlapping windows, exposing the model to the sampling rates it will encounter in the wild.

#Technical Details

Input EEG is sliced into univariate patches and embedded with temporal positional, 3D channel-coordinate, and sampling-rate embeddings before entering the gated temporal-spatial transformer. Pretraining uses medical contrastive learning over the 13-dataset corpus; downstream adaptation fine-tunes on each of the five held-out AD datasets. Across the 20 evaluation settings spanning those five datasets, LEAD achieves the best average ranking, outperforming both conventional EEG classifiers and published EEG foundation models. Pretraining data is preprocessed with notch and 0.5–45 Hz band-pass filtering, average re-referencing, ICA-based artifact removal, and alignment to the standard 19-channel 10-20 montage; downstream datasets keep their native channel layout. Code and a pretrained checkpoint are distributed from the project repository under a Creative Commons Attribution-NonCommercial-ShareAlike 4.0 license, which restricts commercial deployment.

#Applications

The intended user is a group with a modest Alzheimer's EEG cohort and no budget to pretrain from scratch — a memory clinic, a neurology department, or a trial site collecting resting-state recordings. Fine-tuning LEAD on a few hundred local subjects is a far shorter path to a working subject-level classifier than training a network on that cohort alone. Because the model tolerates arbitrary montages and sampling rates, it also fits retrospective analyses of archived EEG collected under protocols that have drifted over the years, and it offers a template for other EEG-based neurological screening tasks where labeled data is similarly scarce.

#Impact

LEAD is an argument that the foundation-model recipe transfers to clinical biosignals where the bottleneck is patient recruitment rather than compute. Its most durable contribution may be the curated corpus and preprocessing pipeline: the repository documents 18 public and private EEG datasets with per-dataset preprocessing notebooks, which lowers the entry cost for anyone benchmarking in this space. The limitations are real and acknowledged — the model is a preprint awaiting peer review, the non-commercial license blocks product use, and cross-dataset transfer in EEG remains sensitive to site-specific acquisition artifacts that no amount of channel alignment fully removes.

At a glance

Released
February 2025
Category
Biosignals
Organization
University of North Carolina at Charlotte

Links

GitHub RepositoryResearch Paper

Tags

contrastive_learningdisease_detectioneegeeg_decodingfoundation_modeltransformer

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