All Competitors

Every biological foundation model, evaluated and ranked by the bio.rodeo team

Showing 1–5 of 5 filtered models

  • CellTosg2Sequence

    ———
    Washington University in St. LouisJune 22, 2026cell_biologycell_type_annotationgene_expression+5

    Single-cell language model that prepends biomedical knowledge-graph tokens to cell sentences, grounding cell type annotation in pathway structure.

    Single-cellLanguage model
    23Openness

  • FLASH

    ———
    Hunter College, CUNYMay 11, 2026drug_discoverydrug_drug_interactiondrug_repurposing+7

    Signed heterogeneous graph foundation model over the SIGMA-KG knowledge graph, predicting drug mode of action and drug-drug interactions zero-shot.

    Small molecule
    10Openness

  • CellAwareGNN

    —1—
    Vanderbilt University Medical CenterFebruary 23, 2026drug_discoveryfoundation_modelgraph_neural_network+4

    Knowledge-graph foundation model for drug repurposing, grounding a biomedical graph in cell-type-specific genetic associations to rank indications.

    Single-cellSmall molecule
    11Openness

  • NetMedGPT

    —2—
    University of Hamburg +1 otherJanuary 4, 2026drug_discoverydrug_repurposingfoundation_model+6

    Transformer foundation model pretrained on a biomedical knowledge graph for zero-shot drug repurposing, target, and adverse-effect prediction.

    Language modelSmall molecule
    24Openness

  • OntoProtein

    152140210
    Zhejiang UniversityJanuary 28, 2022foundation_modelgene_ontologyknowledge_graph+1

    Protein language model that fuses Gene Ontology knowledge graphs with masked language modeling, improving protein function and interaction prediction.

    Protein
    63Openness