All Competitors

Every biological foundation model, evaluated and ranked by the bio.rodeo team

Showing 1–4 of 4 filtered models

  • TransferChrome

    —19—
    Hunan Normal UniversityDecember 14, 2022chromatindeep_learningepigenomic_prediction+4

    Self-attention and densely connected convolutional model for predicting gene expression from histone modifications, with transfer learning for cross-cell-line generalization across 56 REMC cell types.

    DNA & Gene
    22Openness

  • Chromoformer

    3842—
    Seoul National UniversityNovember 4, 2022chromatindeep_learningepigenomic_prediction+4

    Transformer-based model for predicting gene expression from histone modifications, incorporating 3D chromatin interaction data and large genomic windows to capture distal regulatory effects.

    DNA & Gene
    71Openness

  • INTERACT

    1023—
    Lieber Institute for Brain DevelopmentAugust 16, 2022deep_learningdna_methylationepigenomic_prediction+4

    Deep learning model combining CNN and transformer layers to predict DNA methylation regulatory variants in the human brain, enabling fine-mapping of psychiatric disorder risk loci.

    DNA & Gene
    9Openness

  • AttentiveChrome

    2794—
    University of VirginiaDecember 4, 2017chromatindeep_learningepigenomic_prediction+3

    Attention-based deep learning model that predicts gene expression from histone modification signals across 56 cell types with interpretable attention scores.

    DNA & Gene
    80Openness