All Competitors

Every biological foundation model, evaluated and ranked by the bio.rodeo team

Showing 19 of 9 filtered models

  • TMEformer

    Sichuan UniversityMay 20, 2026cancerfoundation_modelin_silico_perturbation+8

    A spatial-transcriptomics foundation model for the tumor microenvironment that produces TME-aware embeddings and enables in silico perturbation from a fixed pretrained checkpoint.

    Spatial omics
    10Openness
  • RNAGAN

    1
    The University of Hong KongMarch 20, 2026cancercell_type_annotationdata_generation+5

    Multipurpose generative adversarial network trained once on single-cell and bulk RNA-seq to perform stratification, marker analysis, data generation, and vectorization.

    Single-cell
    60Openness
  • evoCancerGPT

    Dana-Farber Cancer InstituteFebruary 14, 2026cancerfoundation_modelgene_expression+5

    A decoder-only single-cell foundation model that forecasts future single-cell gene expression in cancer evolution from prior cell states, generalizing zero-shot to held-out cancers.

    Single-cell
    11Openness
  • STPAINTER

    University of Science and Technology of China +2 othersFebruary 13, 2026cancerdiffusionfoundation_model+4

    A pan-cancer pretrained latent diffusion model that enhances spatial transcriptomics, imputing genome-wide expression from sparse panels with zero-shot generalization.

    Spatial omicsSingle-cell
    4Openness
  • TwinCell

    1
    DeepLifeJanuary 29, 2026cancerfoundation_modelgene_regulation+5

    Large causal cell model trained on cancer perturbation data that generalizes zero-shot to patient-derived cells for therapeutic target prioritization.

    Single-cell
    19Openness
  • Seoul National University HospitalJanuary 12, 2026cancercell_type_annotationdata_generation+6

    LLM-based generative model that synthesizes complete single-cell RNA-seq profiles from tissue and disease metadata alone, treating cells as gene-expression token sequences.

    Single-cellSpatial omics
    2Openness
  • Baylor College of MedicineDecember 25, 2025cancerfoundation_modelligand_target_inference+7

    A pair of spatially aware transcriptomic foundation models (50um-Local and 250um-Extended) for multi-scale analysis of spot-resolution cancer spatial transcriptomes.

    Spatial omics
    12Openness
  • PathChat

    420
    Mahmood Lab +4 othersJuly 10, 2024cancerdiagnosisfoundation_model+7

    A multimodal vision-language copilot for human pathology that analyzes histology images and answers diverse pathology queries in natural language.

    PathologyLanguage model
    35Openness
  • Prov-GigaPath

    61783861.3K
    Microsoft ResearchMay 22, 2024cancerfoundation_modelhistology+3

    Whole-slide pathology foundation model pretrained on 1.3 billion tiles from 171,189 clinical WSIs. Achieves state-of-the-art on 25 of 26 pathology benchmark tasks.

    Pathology
    58Openness