All Competitors

Every biological foundation model, evaluated and ranked by the bio.rodeo team

Showing 1–4 of 4 filtered models

  • CLM-X

    ———
    Hangzhou Institute of Medicine, CASFebruary 18, 2026batch_correctioncell_biologycell_type_annotation+6

    A multimodal single-cell foundation model with a multiway Transformer that jointly models scRNA-seq and scATAC-seq, including RNA-only, ATAC-only, and paired inputs.

    Single-cell
    4Openness

  • PanFoMa

    ———
    Shanghai Jiao Tong University +4 othersDecember 2, 2025batch_correctioncancercell_type_annotation+7

    A lightweight pan-cancer single-cell foundation model with a hybrid Transformer-Mamba architecture, released alongside the PanFoMaBench benchmark.

    Single-cell
    13Openness

  • scDisInFact

    1325—
    Zhang LabJanuary 30, 2024batch_correctiongene_expressionperturbation+2

    Disentangled VAE framework for joint batch correction, condition-key-gene detection, and perturbation prediction in multi-batch multi-condition scRNA-seq data.

    Single-cell
    79Openness

  • scGen

    348617—
    Theis LabJuly 29, 2019batch_correctiongenerativeout_of_distribution_generalization+4

    Variational autoencoder that predicts single-cell perturbation responses across cell types and species using latent space vector arithmetic.

    Single-cell
    43Openness