All Competitors
Every biological foundation model, evaluated and ranked by the bio.rodeo team
Showing 1–11 of 11 filtered models
Self-supervised 3D masked autoencoder for volumetric fluorescence microscopy, aligned to ESM2 embeddings to predict protein localization.
ImagingSingle-cell71Openness- Weizmann Institute of Science +1 otherOctober 19, 2025gut_microbiomemasked_autoencodermetagenomics+2
Self-supervised models that embed gut metagenomic abundance profiles for robust phenotype prediction in data-limited, cross-cohort settings.
DNA & Gene23Openness EyeCLIP
8765—The Hong Kong Polytechnic University +5 othersJune 21, 2025clipcontrastive_learningcross_modal_retrieval+11CLIP-based vision-language foundation model for eye imaging, enabling zero-shot disease detection and cross-modal retrieval across 11 modalities.
ImagingLanguage model15OpennessSpark3D (S3D)
1573936Masked-autoencoder foundation model that pre-trains a 3D Residual Encoder U-Net on roughly 39,000 brain MRIs for volumetric image segmentation.
Imaging45OpennessMasked-autoencoder foundation model pretrained on digital-stethoscope heart sounds and single-lead ECG for cardiovascular disease detection.
Biosignals22OpennessCREMA
—7—Self-supervised foundation model for 12-lead ECG, pairing masked autoencoder pretraining with contrastive regularization for robust diagnostics.
Biosignals10OpennessEyeFound
—43—The Hong Kong Polytechnic University +3 othersMay 18, 2024disease_diagnosisfoundation_modelmasked_autoencoder+7Ophthalmic imaging foundation model pretrained on 2.78M images across 11 modalities for diagnosis, prognosis, and visual question answering.
Imaging4OpennessRETFound
660938105University College London +1 otherSeptember 13, 2023disease_detectionfoundation_modelimage_classification+7Self-supervised foundation model for retinal imaging, pretrained on 1.6 million unlabelled fundus and OCT scans to detect ocular and systemic disease.
ImagingPathology30OpennessBrainLM
18130—Yale University +2 othersSeptember 12, 2023brain_state_forecastingclinical_variable_predictionfmri+7fMRI foundation model pretrained with masked autoencoding on roughly 6,700 hours of recordings for clinical prediction and network discovery.
Biosignals25Openness