All Competitors

Every biological foundation model, evaluated and ranked by the bio.rodeo team

Showing 13 of 3 filtered models

  • TMEformer

    Sichuan UniversityMay 20, 2026cancerfoundation_modelin_silico_perturbation+8

    A spatial-transcriptomics foundation model for the tumor microenvironment that produces TME-aware embeddings and enables in silico perturbation from a fixed pretrained checkpoint.

    Spatial omics
    10Openness
  • RegVelo

    1538
    Helmholtz MunichMay 11, 2026cell_fate_mappingchromatingene_regulatory_network_inference+6

    Bayesian deep generative model that integrates gene regulatory networks into RNA velocity inference, enabling cell fate mapping and in silico perturbation of transcription factors.

    Single-cell
    59Openness
  • CellOracle

    463562
    Morris LabFebruary 8, 2023chromatingene_regulatory_network_inferencegraph_neural_network+6

    Machine learning framework for inferring cell-type-specific gene regulatory networks from single-cell multi-omics data and simulating transcription factor perturbations in silico.

    Single-cell
    18Openness