All Competitors

Every biological foundation model, evaluated and ranked by the bio.rodeo team

Applications

Architectures

Learning Paradigms

Biological Subjects

Showing 18 of 8 filtered models

Imaging

BiomedParse

Microsoft Research

A biomedical foundation model for joint segmentation, detection, and recognition across nine imaging modalities using natural language prompts.

65614831K
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Pathology

H-optimus-0

Bioptimus

A 1.1B parameter open-source vision transformer for histopathology, trained on 500,000+ H&E whole slide images from 4,000 clinical practices worldwide.

108660.5K
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Imaging

CryoSAM

Xu Lab

Training-free cryo-ET tomogram segmentation that adapts SAM and DINOv2 for 3D volumetric data, enabling full tomogram segmentation from a single user prompt.

1535
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Pathology

Hibou

HistAI

DINOv2-based Vision Transformer foundation models for digital pathology, trained on over 1 million whole-slide images. Available as Hibou-B (86M) and Hibou-L (307M) under Apache 2.0.

776371.6K
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Imaging

Cytoland

Chan Zuckerberg Biohub / Mehta Lab

A suite of virtual staining models that translate label-free microscopy images into fluorescent-equivalent staining of nuclei and plasma membranes.

918
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Pathology

UNI

Mahmood Lab

Self-supervised pathology foundation model (ViT-L/16, DINOv2) pretrained on 100M+ H&E tiles from 100,000+ whole-slide images. State-of-the-art on 34 pathology tasks.

7171.3K33.9K
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Imaging

CellSAM

Van Valen Lab

Universal cell segmentation model adapting Meta's SAM for biology. Segments mammalian cells, yeast, and bacteria across diverse imaging modalities with human-level accuracy.

19312
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Imaging

CellViT

Institute for AI in Medicine

Vision Transformer for cell instance segmentation and classification in H&E digital pathology, extended by CellViT++ with foundation model backbones and few-shot adaptation.

37326
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