All Competitors
Every biological foundation model, evaluated and ranked by the bio.rodeo team
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Architectures
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Biological Subjects
Showing 1–6 of 6 filtered models
LigandMPNN
Institute for Protein Design
Protein sequence design method that explicitly models small molecules, nucleotides, and metals at atomic resolution, enabling ligand-aware design with 100+ validated designs.
Evo
Arc Institute
A 7B parameter genomic foundation model using StripedHyena architecture to model prokaryotic DNA, RNA, and proteins at single-nucleotide resolution with 131k token context.
5' UTR-LM
Princeton University
A transformer language model pretrained on 5' UTR sequences across five species to predict mRNA translation efficiency, ribosome loading, and expression levels.
RfamGen
Kyoto University / Waseda University
A VAE-based generative model that designs novel functional RNA sequences by encoding MSA and consensus secondary structure constraints from Rfam families.
Efficient Evolution of Human Antibodies from Protein Language Models
Stanford University
Zero-shot antibody affinity maturation using ESM pseudolikelihood scoring. Improves binding up to 160-fold with no antigen-specific training data.
ProteinMPNN
Institute for Protein Design
Message passing neural network for fixed-backbone protein sequence design. Achieves 52.4% native sequence recovery, far surpassing Rosetta's 32.9%.