All Competitors

Every biological foundation model, evaluated and ranked by the bio.rodeo team

Showing 15 of 5 filtered models

  • PerturbGen

    21
    Wellcome Sanger InstituteMarch 5, 2026cell_biologyfoundation_modelgene_expression+6

    Generative single-cell foundation model trained on 100M+ transcriptomes that predicts how genetic perturbations reshape cellular trajectories over time.

    Single-cell
    72Openness
  • MilaFebruary 23, 2026diffusiongene_expressiongenerative+3

    Functional diffusion model that predicts single-cell perturbation responses by generating over distributions embedded in a Hilbert space, capturing population-level response variability.

    Single-cell
    51Openness
  • scDFM

    395
    Westlake UniversityFebruary 6, 2026flow_matchinggene_expressiongenerative+4

    Distributional flow matching model for single-cell perturbation prediction that models population-level expression shifts using a graph-aware differential-attention transformer.

    Single-cell
    54Openness
  • scGPT

    1.6K1.1K
    Bowang LabFebruary 26, 2024foundation_modelgene_expressionperturbation+1

    A generative pre-trained transformer for single-cell multi-omics, pretrained on 33 million human cells for cell annotation, batch correction, and perturbation prediction.

    Single-cell
    82Openness
  • Zhang LabJanuary 30, 2024batch_correctiongene_expressionperturbation+2

    Disentangled VAE framework for joint batch correction, condition-key-gene detection, and perturbation prediction in multi-batch multi-condition scRNA-seq data.

    Single-cell
    79Openness