All Competitors
Every biological foundation model, evaluated and ranked by the bio.rodeo team
Showing 1–24 of 61 filtered models
DaX
1——Pathology vision foundation model adapting DINOv3-style self-supervised learning to whole-slide histopathology across continuous magnifications and scales.
Pathology11OpennessSQUALL
———Multimodal foundation model pretrained on 1.76 billion paired histology-spatial transcriptomics spots, linking whole-slide images to spatial molecular programs.
PathologySpatial omics6OpennessSciCore-Omics
8—230A tri-modal foundation model unifying histology images, spatial transcriptomics, and biological language for zero-shot spatial biology and pathology reasoning.
PathologySpatial omics65OpennessSTMDiT
———A diffusion transformer that synthesizes H&E histopathology image patches conditioned jointly on spatial transcriptomics gene expression and morphological embeddings.
PathologySpatial omics44OpennessBRIDGE
———The University of Hong KongMay 8, 2026contrastive_learningfoundation_modelgene_expression_prediction+8A multi-organ foundation model aligning histology image features with spatial-transcriptomics gene expression across 13 organs for zero-shot virtual ST and survival prediction.
PathologySpatial omics31OpennessPhoenix
———Latent flow-matching foundation model that predicts pan-cancer spatially-resolved single-cell gene expression directly from routine H&E histology slides.
PathologySpatial omics8OpennessH2O
———Tencent AI for Life Science Lab +2 othersApril 24, 2026contrastive_learningfoundation_modelgene_expression+6A foundation model that predicts spatial transcriptomics and proteomics directly from routine H&E whole-slide images using a vision transformer aligned with a language model.
PathologySpatial omics7OpennessSMILE
———A Schrödinger-bridge diffusion model for virtual multiplex staining that translates standard H&E histology into multiplex immunohistochemistry images.
Pathology8OpennessMuPD
———A generative diffusion-transformer foundation model that embeds H&E histology, RNA profiles, and clinical text in a shared latent space for zero-shot cross-modal synthesis.
PathologySpatial omics15OpennessSTORM
—1—Stanford UniversityApril 4, 2026clinical_outcome_predictionfoundation_modelgene_expression_prediction+7A hierarchical multimodal foundation model integrating spatial transcriptomics and H&E histology for biological discovery and platform-agnostic clinical prediction.
Spatial omicsPathology17OpennessGenBio-PathFM
3423171.1B-parameter histopathology foundation model trained on public data with a JEDI (JEPA+DINO) dual-stage strategy, reaching state-of-the-art on THUNDER, HEST, and PathoROB.
Pathology21OpennessUNIStainNet
4——Foundation-model-guided virtual staining that generates four IHC markers (HER2, Ki67, ER, PR) from H&E using a single SPADE-UNet conditioned on a frozen UNI encoder.
Pathology17OpennessA self-supervised, cell-centric pretraining strategy that distills morphology and microenvironment views of each cell into a unified embedding for virtual spatial omics from microscopy.
Spatial omicsImagingPathology15OpennessEVA
——105Cross-species, multimodal foundation model of immunology and inflammation that harmonizes transcriptomics and histology into unified patient-level representations.
Single-cellRNAPathology27OpennessMoLF
———A pan-cancer generative model that predicts spatial gene expression from H&E histology using conditional flow matching with a mixture-of-experts velocity field.
PathologySpatial omics9OpennessFOCUS
———Generative foundation model that enhances spatial transcriptomics by conditioning on H&E histology, scRNA-seq references, and spatial co-expression priors.
Spatial omicsPathologySingle-cell4OpennessGPFM
12637—Hong Kong University of Science and Technology +3 othersNovember 1, 2025cancer_diagnosisfeature_extractionfoundation_model+8A generalizable computational-pathology foundation model trained on ~190M histopathology patches via unified knowledge distillation from UNI, Phikon, and CONCH.
Pathology84OpennessMIMO
1223—A medical vision-language model that accepts visual-referring multimodal input and produces pixel-grounded multimodal output, jointly answering and segmenting medical images.
ImagingLanguage model11OpennessSigPhi-Med
583Chongqing University of TechnologyJuly 1, 2025histologyinstruction_tuningmedical_image_understanding+5A 4.2B-parameter lightweight biomedical vision-language assistant built on Phi-2 that outperforms larger LLaVA-Med models on medical visual question answering.
ImagingLanguage model15OpennessChiron-o1
5996Medical multimodal LLM (2B and 8B) trained for generalizable, step-by-step clinical reasoning via Mentor-Intern Collaborative Search.
PathologyImaging67OpennessLingshu
31543.8KA generalist medical multimodal LLM built on Qwen2.5-VL for unified medical image understanding, visual question answering, report generation, and clinical reasoning across 12+ imaging modalities.
ImagingLanguage model70Openness